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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845536.1_cds_XP_016509364.1_22302
CDS Infomation

[gene=LOC107826850] [db_xref=GeneID:107826850] [protein=mitogen-activated protein kinase kinase kinase YODA-like isoform X2] [protein_id=XP_016509364.1] [location=complement(join(16964..16992,17259..17406,17585..17710,17792..17851,19144..19219,19581..19744,19835..19897,20261..20348,20428..21039,22948..23327))] [gbkey=CDS]
Sequence

ATGCCATTTTCAAGAAAAGCATTTTCACTCTTTTCTAGTTCTTCTGGTTCTACTTCTCCT
TCTGAATCTCCTAACGCCCGAAAAATTTATGGAGGTGGAAGACGGCTTACTCGGGTGCGC
AAATTGAGACATGTTGGTGATGATGAGGTTGATTTGCAGCACACGAATTTTCATCCTTTT
GTTGTTGATGAACGTTCGAAATCTATGCCAGTTTCTCCTGATAACTACAAGAATTCTGGG
TCTCGGTCTTTTCAGCAGTCTTGTCACTGGTCCAAATCCGCCGAGCCTCAACCTTTGCCG
CTTCCTGAGCTCAATTCTGCTCCAAAACAGAATTTGCTTTCCATAGTCCAGGGGGATGCT
TCAAATCCTGCTGTCATAAGGGATCCTTCTTATCATGCTCCAGTACAGATGACAAATCCT
GTGCATAGAAGATCATCTACTCCATCTTATCGCCGTAGATGTTTCACGCAGGATCCGAAT
GCTGAAGGTGTTGAAGAGAACTTCAGACTTGATGTCTCCGCTAGAAGTGCTCCAGGCAGC
GGTTTTACAAGTCCGAATCTTAGCCCAAAACGATATAACTCAGTAGACCTTTTCCGTCCT
ACATTTCATCAAGCATCATCAGCTTCAGACATTTCTTTGGATAGACTAGCAGGCTGTCCC
ATCCAACTTTCAAGTGCAAGGGTTACACAAAGCGCTGATCATTCTCCCCTTAGTAGCCCG
ACTCTGCGGAATCCAGTCAACAGAACTTGGAATCACCAAAATGGTGCTGTGCATTCACAT
CACAAATCACTTCCAGAAAGTTCAGTGGGTTGGCCTGAAAGCAATAATGTGCACCCTCTA
CCACTTCCACCCGGAGTTTCACAACAGCCACAATTACCTACCGGCCATAACAATATGGAT
CAACCAGATGTTCAATCAGTGAAAGGTCAATGGCAAAAGGGGCGACTTTTAGGGCGTGGT
ACTTATGGAAGTGTATATGAAGCTACTAATCGTGAAACTGGTGCTTTGTGTGCGATGAAA
GAAGTTGATCTCAATCCAGATGACCCTAAATCTGCTGAATGTATAAAGCAGCTAGAACAG
GAAATAAGAGTGCTCCGGCAGTTAAAGCACCCAAATATTGTTCAATATTACGGAAGTGAA
ACAATGGAAGATATCTTTTGCATATATCTGGAATATGTTCACCCAGGATCAATTAATAAG
TATGTCCGGGAACATGGTGGAGCTATGACAGAGTCTATAGTTCGAAATTTTACACGGCAT
ATAGTATCAGGGCTGGCTTACTTGCATAGCACTAAGACAATACACAGGGACATTAAGGGG
GCAAATTTGCTTGTTGACGCATGCGGAGTTGTCAAGCTTGCAGACTTCGGATTAGCAAAA
CATCTCTCAGCGTGTGCAACTGATCTATCTCTGAAAGGGAGCCCTCACTGGATGGCTCCA
GAGGTAATGCAGGCTATGTTACGCAAAGATGCCAATCCAGAGCTTGCCTGTGCTATTGAT
ATATGGAGTCTGGGTTGTACTGTCATTGAGATGTACACTGGACAGCCCCCTTGGAGTGGA
TTAGACGGGGTGAAAGCTATGTTCAGTGCACTGAACAAATCACCACCTGTACCAGAAACG
TTATCTTCGGAAGGAAAGGATTTCCTCAGGTGCTGCTTTCAGAGAAAACCTGCAGATCGG
CCGACAGCTCTGTTGCTACTTGAGCATCCTTTCTTAGAGTCCAAAAGACCCAACAAACTT
GAGTAA

Peptide Sequence

PEP ID

XP_016509364.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like isoform X2 [Nicotiana tabacum]
Sequence

MPFSRKAFSLFSSSSGSTSPSESPNARKIYGGGRRLTRVRKLRHVGDDEVDLQHTNFHPF
VVDERSKSMPVSPDNYKNSGSRSFQQSCHWSKSAEPQPLPLPELNSAPKQNLLSIVQGDA
SNPAVIRDPSYHAPVQMTNPVHRRSSTPSYRRRCFTQDPNAEGVEENFRLDVSARSAPGS
GFTSPNLSPKRYNSVDLFRPTFHQASSASDISLDRLAGCPIQLSSARVTQSADHSPLSSP
TLRNPVNRTWNHQNGAVHSHHKSLPESSVGWPESNNVHPLPLPPGVSQQPQLPTGHNNMD
QPDVQSVKGQWQKGRLLGRGTYGSVYEATNRETGALCAMKEVDLNPDDPKSAECIKQLEQ
EIRVLRQLKHPNIVQYYGSETMEDIFCIYLEYVHPGSINKYVREHGGAMTESIVRNFTRH
IVSGLAYLHSTKTIHRDIKGANLLVDACGVVKLADFGLAKHLSACATDLSLKGSPHWMAP
EVMQAMLRKDANPELACAIDIWSLGCTVIEMYTGQPPWSGLDGVKAMFSALNKSPPVPET
LSSEGKDFLRCCFQRKPADRPTALLLLEHPFLESKRPNKLE

Transcript Sequence

Gene sequence data has not been registered.